Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015938525.1_cds_XP_016483367.1_74489
CDS Infomation

[gene=LOC107804058] [db_xref=GeneID:107804058] [protein=VIN3-like protein 1] [protein_id=XP_016483367.1] [location=complement(join(2213..3390,3493..3803,4375..4832))] [gbkey=CDS]
Sequence

ATGTCTGAGCAACTCCCAAAGTTTAGTAAAAAGCAATTTAAGACTCAAGAGCAAAAAAGA
GCATCTTCAAGTCCCAAGGATCATTCTTCTAGAAAGCAGCACAGGAAAGGGGAAAACCCT
CTCCGAATCCCACCAGCTACAGAGCCGTGTGAAGATGTGAAATGTTCAAATTCATGGATC
TGCAAAAATGCCGCATGCCGGGCCACTATTTCGATTGATGACAATTTTTGCAAAAGGTGC
TCTTGTTGCATTTGTCACTTATTTGATGATAACAAGGATCCTAGTCTTTGGTTGGAGTGC
ACATCTGAATCTGGTCAGGGGGGCTCATGTGGCTTGACTTGCCACATTGAGTGTGCCCTC
CAACGTGAGAAGGTGGGAGTTGTTGATCTAGGACAACTGATGCAGCTAGATGGGAGCTAT
TGTTGTGCTTCTTGTGGTAAAGTCTCAGGAATTCTTGGGTTTTGGAAGAAACAGCTTTGT
GTAGCTAAGGATGCTCGTCGTGTTGACATCCTCTGCTACAGAATATACTTGAGTTACAGG
CTCCTGGACGGGACATCCAGATTTAAAGAGCTCCATGAAATTGTTAAAGAAGCCAAGGCC
AAATTGGAGATGGAAGTGGGCCCAGTGAATGGAGTATCATCGAAGATGGCTCGGGGAATT
GTTAGCAGACTTTCTATTGCCAGCGATATTCAGTCATTGTGCTCGATTGCCATTGAGAAA
GCTGATGAATGGTTGACAACAAAGACTAACAAACCTTCTAATTCCTCAGAGGGTTCACTT
CCTGCAGCGTGCAAATTTCTTTTTGAGGAAGTGACGTCAACTTCGGTTGTAATTGTTCTG
ATAGAAGTATCCGCTGAATCTTCTGAAGATGTCAAGGGCTACAAGCTCTGGTACTGCAAG
GCCAGAGAAGACACTTATACACAAGAACCTGTTTGTGTCTTTCCAAGAACTCAGCGAAGG
ATTTTGATATCGAATTTACAGCCTTGCACAGAGTATTCTTTTCGGATAGTTTCCTATACA
GACATCAGTGATGTGGGACACTCTGAGGCGAAGTGTTTCACAAAGAGTATTGAGATAATA
CACAGGAAGTCTAATTCAGTAGCAGGACACAAAAGGAAGGTGAATCAGGATACTGGAGGA
AACTCTGGCTCCAAAGAGGGCTACTACACTGGAAAAGACATTGAGTTTGATTCTGGATTC
AAGGTCCGAGACCTTGGTAAAATTCTAAGACTGGCATGGGCTCAACAGCAAGGATGTTTG
GAGGGATTTTGTGGACCTTCATTTGCAAAATGCTGTGAGTCTTGTAGTACTGTTAAGCCT
GAACCTGTACAGGAAGAGAGGAAGCCATCTACTTCTCGCCAGCTTGACTTAAATGTTGCT
TCAGTACCCGATTTAAATGAAGAGTTAACCCCCTCGTCCAGAGATGAAGATAATGGCTGC
ACTTTAGGGCAGACTGTTGAAGCAGTTGATGATGCCACCTCTCATGACAATGAGAGGAAT
GGTCTTGCCGGATCACATGGTAGCGGAGATTCCCAGAACTGGAACCAGGGGAAGAATGGA
GATGTGTCTGCTGTTGGTTCTCAGATGGAAGATTTTCGGAAGAGGGGAACTAGCAATAAT
CGTGAGGCACATGACTCTGATAGCACCTTGGTCAATGGTTCACCTATCCGAATTCGTACA
GGGGGCTTGGATGAGAACTTTGAATACTGTGTTAAGATCATCCGTTGGCTGGAATGTCAG
GGTTTGATCGAGAAGGAGTTCAGGTTAAAGTTGCTTACTTGGTTTAGCTTGAGATCAACG
GAGCAGGAGCGTAGGGTGGTAAATACCTTCATTCAAACACTAATTGATGATCCAGGTAGC
TTGGCTGGTCAACTGGTTGATACCTTTTCAGAAATGATATCCAGCAAGAGGCCACCGAAT
GGTTTTTGTTGTAAGCTTTGGCATTAA

Peptide Sequence

PEP ID

XP_016483367.1
PEP Infomation

PREDICTED: VIN3-like protein 1 [Nicotiana tabacum]
Sequence

MSEQLPKFSKKQFKTQEQKRASSSPKDHSSRKQHRKGENPLRIPPATEPCEDVKCSNSWI
CKNAACRATISIDDNFCKRCSCCICHLFDDNKDPSLWLECTSESGQGGSCGLTCHIECAL
QREKVGVVDLGQLMQLDGSYCCASCGKVSGILGFWKKQLCVAKDARRVDILCYRIYLSYR
LLDGTSRFKELHEIVKEAKAKLEMEVGPVNGVSSKMARGIVSRLSIASDIQSLCSIAIEK
ADEWLTTKTNKPSNSSEGSLPAACKFLFEEVTSTSVVIVLIEVSAESSEDVKGYKLWYCK
AREDTYTQEPVCVFPRTQRRILISNLQPCTEYSFRIVSYTDISDVGHSEAKCFTKSIEII
HRKSNSVAGHKRKVNQDTGGNSGSKEGYYTGKDIEFDSGFKVRDLGKILRLAWAQQQGCL
EGFCGPSFAKCCESCSTVKPEPVQEERKPSTSRQLDLNVASVPDLNEELTPSSRDEDNGC
TLGQTVEAVDDATSHDNERNGLAGSHGSGDSQNWNQGKNGDVSAVGSQMEDFRKRGTSNN
REAHDSDSTLVNGSPIRIRTGGLDENFEYCVKIIRWLECQGLIEKEFRLKLLTWFSLRST
EQERRVVNTFIQTLIDDPGSLAGQLVDTFSEMISSKRPPNGFCCKLWH

Transcript Sequence

Gene sequence data has not been registered.